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Profil
Forschungsinteressen
In meiner Arbeitsgruppe beschäftigen wir uns mit Populationsgenomik (Ganzgenomanalysen), Ökologie und Morphologie von Süßwasserfischen, derzeit mit dem Schwerpunkt Elritze (Phoxinus spp.). Dazu führen wir ein standardisiertes Monitoring mittels Punktabundanzbefischungen durch, erfassen ökologische Parameter, sammeln Fische und untersuchen sie morphologisch (geometrische Morphometrie) und trophisch (Mageninhaltsanalysen, stabile Isotope). Am Ende werden die Ergebnisse der trophischen und morphologischen Untersuchungen mit den Ergebnissen der Ganzgenomanalysen zusammengeführt, um Aussagen über Art-/Populationsgrenzen, ökologische Präferenzen einzelner Arten und den Einfluss von Hybridisierung durch Besatzmaßnahmen treffen zu können. Alle gewonnenen genetischen Resourcen werden in unserer Biobank deponiert und entstandene Datensätze und Analysecode auf open source Datenbanken zur Verfügung gestellt.
Infos über weitere Projekte findet ihr auf meiner Homepage: https://madlenstange.github.io/stangelab/
Projekte
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Hybridschwarmevolution in Elritzen
Leitung: Dr. Madlen Stange
Publikationen
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2025/07
An ecological trait matrix of Neotropical freshwater fishes
Scientific data, 12
2025/05
Type genomics: a Framework for integrating Genomic Data into Biodiversity and Taxonomic research
Systematic Biology
2025/05
Human impacts on the distribution and genetic diversity of Eurasian minnows (Phoxinus: Leuciscidae) in the Rhenish Massif
Knowledge and Management of Aquatic Ecosystems, 426
2025/01
A chromosome-level, haplotype-resolved genome assembly and annotation for the Eurasian minnow (Leuciscidae: Phoxinusphoxinus) provide evidence of haplotype diversity
Gigascience, 14
2025/01
Comparison of whole genome sequencing performance from fish swabs and fin clips
BMC Research Notes, 1, 18
2023/01
Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data
Science Translational Medicine, 680, 15
2022/05
Alpha Variant Coronavirus Outbreak in a Nursing Home Despite High Vaccination Coverage: Molecular, Epidemiological, and Immunological Studies
4, 77
2022/03
Determinants of SARS-CoV-2 transmission to guide vaccination strategy in an urban area
Virus evolution, 1, 8
2022/03
Benthic–limnetic morphological variation in fishes: Dissolved organic carbon concentration produces unexpected patterns
3, 13
2022/01
External Quality Assessment of SARS-CoV-2 Sequencing: an ESGMD-SSM Pilot Trial across 15 European Laboratories
Journal of Clinical Microbiology, 1, 60
2021/12
Quantification of the spread of SARS-CoV-2 variant B.1.1.7 in Switzerland
Epidemics, 37
2021/05
Global Genomic Analysis of SARS-CoV-2 RNA Dependent RNA Polymerase Evolution and Antiviral Drug Resistance
Microorganisms, 5, 9
2021/03
SARS-CoV-2 outbreak in a tri-national urban area is dominated by a B.1 lineage variant linked to a mass gathering event
PLOS pathogens, 3, 17
2021/03
SARS-CoV-2 N501Y Introductions and Transmissions in Switzerland from Beginning of October 2020 to February 2021—Implementation of Swiss-Wide Diagnostic Screening and Whole Genome Sequencing
Microorganisms, 4, 9
2021/02
The importance of genomic variation for biodiversity, ecosystems and people
Nature Reviews Genetics, 2, 22
2021/01
Natural history study of an understudied sea catfish species from Panama (Siluriformes: Ariidae)
Neotropical Ichthyology, 4, 19
2019/09
Why the long face? Comparative shape analysis of miniature, pony, and other horse skulls reveals changes in ontogenetic growth
7
2018/08
Morphological variation under domestication: how variable are chickens?
8, 5
2018/04
Shape variation and modularity of skull and teeth in domesticated horses and wild equids
1, 15
2018/03
Study of morphological variation of northern Neotropical Ariidae reveals conservatism despite macrohabitat transitions
1, 18
2018/01
Bayesian Divergence-Time Estimation with Genome-Wide Single-Nucleotide Polymorphism Data of Sea Catfishes (Ariidae) Supports Miocene Closure of the Panamanian Isthmus
4, 67
2016/07
Evolution of opercle bone shape along a macrohabitat gradient: species identification using mtDNA and geometric morphometric analyses in neotropical sea catfishes (Ariidae)
Ecology and Evolution, 16, 6
2015/11
Growth trajectories in the cave bear and its extant relatives: an examination of ontogenetic patterns in phylogeny
1, 15
2013/08
Strong genome-wide divergence between sympatric European river and brook lampreys
CB/Current biology, 15, 23