Zentrum für molekulare Biodiversitätsforschung (zmb)

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2026

• 2026/03

  Heil, K., Alioto, T., Böhne, A., Brown, T., Chadwick, E., Chua, P., de Guttry, C., De Panis, D., Goble, C., Gut, I., Gut, M., Juty, N., McTaggart, S., Najera-Cortazar, L., Paupério, J., Rewicz, T., Shaw, F., Soiland-Reyes, S., Waterhouse, R., Woollard, P., Vos, R.

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  Integrating the biodiversity genomics continuum: harmonising data from barcodes to reference genomes

  Research Ideas and Outcomes, 12

  https://doi.org/

• 2026/03

  Lopes, R.J., Böhne, A., Marcussen, T., Oomen, R.A., Struck, T.H., Aguilera, L., Gut, M., Câmara Ferreira, F., Cruz, F., Gómez-Garrido, J., Alioto, T.S., Monteiro, R.

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  ERGA-BGE reference genome of the Azores Bullfinch - Pyrrhula murina Godman, 1866: an IUCN vulnerable species endemic to a single island in the Azores Archipelago (Portugal)

  Open Research Europe, 5

  https://doi.org/

• 2026/03

  Vasileiadou, K., Manousaki, T., Böhne, A., Fernández, R., Escudero, N., Genoscope Sequencing Team, ., Moussy, A., Cruaud, C., Labadie, K., Demirdjian, L., Istace, B., Couloux, A., Wincker, P., H. Oliveira, P., Aury, J., Monteiro, R.

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  ERGA-BGE reference genome of Diadema setosum: the Black Longspine Urchin invading the Mediterranean sea

  Open Research Europe, 6

  https://doi.org/

• 2026/02

  Meng, G., Carvalho, L.S., Podsiadlowski, L., Huber, B.A.

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  Low coverage whole genome sequencing reveals a new subfamily of daddy long-legs spiders from Brazilian Caatinga (Araneae: Pholcidae)

  Arthropod Systematics & Phylogeny, 84

  https://doi.org/

• 2026/02

  Kück, P., Wilkinson, M.

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  Clarifying Xenacoelomorpha phylogeny: A polarized quartet-based analysis with SeaLion

  Gene

  https://doi.org/

• 2026/02

  Koureas, D., Beja, P., Blaxter, M., Böhne, A., Bourlat, S., Ekrem, T., Emerson, B., Heil, K., Melo-Ferreira, J., Price, B., Vos, R., Addink, W., Alioto, T., Aravanopoulos, F., Astrin, J., Aury, J., Barnes, I., Bruschini, C., Buzan, E., Cochrane, G., Cserkész, T., Dailianis, T., Duijm, E., Dunshea, G., Fernández, R., Ferreira, S., Formenti, G., Fratini, S., Gkagkavouzis, K., Goble, C., Grabowski, M., Grüning, B., Gut, I., Gut, M., Harrison, P., Hausmann, A., Höglund, J., Iacolina, L., Iannucci, A., Jakobsen, K., Kõljalg, U., Lantz, H., Lewin, H., Macher, J., Manousaki, T., Martin, F., Mengual, X., Oliveira, P., Oomen, R., Raupach, M., Riesgo, A., Roest Crollius, H., Somogyi, A., Struck, T., Svardal, H., Tooming-Klunderud, A., Triantafyllidis, A., Vinnere Pettersson, O., Wagner, M., Wincker, P., Yan, N., Alonso, J., Casino, A., Ciofi, C., Daňková, G., Hollingsworth, P., Lawniczak, M., Mazzoni, C., Waterhouse, R.

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  Biodiversity Genomics Europe (BGE) Project – Abridged Grant Proposal

  Research Ideas and Outcomes, 12

  https://doi.org/

• 2026/02

  Oriowo, T.O., Smith, S., Thormann, J., Sternberg, N., Böhne, A., Stange, M.

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  Different sex determination systems in two closely related Eurasian minnow (Phoxinus) species

  Heredity

  https://doi.org/

• 2026/02

  Fraser, B., Gasparini, C., Santi, F., Böhne, A., Monteiro, R., Marcussen, T., Oomen, R.A., Struck, T.H., Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory Team, ., Wellcome Sanger Institute Scientific Operations: Sequencing Operations, ., Wellcome Sanger Institute Tree of Life Core Informatics Team, ., Denton, A., Howard, C., Howe, K., Blaxter, M., McCarthy, S., Wood, J.M.D., Martin, F., Sinha, S., Haggerty, L., Bortoluzzi, C.

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  ERGA-BGE reference genome of Gambusiaholbrooki, a globally invasive freshwater fish

  Open Research Europe, 6

  https://doi.org/

• 2026/02

  Antaloudaki, E., Karakasi, D., Stratakis, M., Bitzilekis, E., Lymberakis, P., Poulakakis, N., Manousaki, T., Böhne, A., Monteiro, R., Fernández, R., Escudero, N., Genoscope Sequencing Team, ., Moussy, A., Cruaud, C., Labadie, K., Demirdjian, L., Wincker, P., Oliveira, P.H., Aury, J., Martin, F., Barrera Enriquez, V.P., Haggerty, L., Bortoluzzi, C.

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  ERGA-BGE reference genome of Carlina diae, an endemic spineless thistle of Crete, Greece

  Open Research Europe, 6

  https://doi.org/

• 2026/02

  Postma, A., Klynsmith, L., Duong, T.A., Allison, J.D., Smidt, W., Waterhouse, R.M., Lesny, P., Oeyen, J.P., Petersen, M., Martin, S., Liu, S., Zhou, X., Ziesmann, T., Donath, A., Mayer, C., Misof, B., Niehuis, O., Peters, R.S., Podsiadlowski, L., Coetzee, M.P.A., Joubert, F., Slippers, B.

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  Genome and transcriptome‐based identification and expression profiling of chemosensory gene families across developmental stages and tissues in Sirex noctilio (Hymenoptera: Siricidae)

  Insect Molecular Biology

  https://doi.org/

• 2026/01

  Schmidt-Rhaesa, A., Sorensen, M.V., Ott, J., Raeker, J.

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  A new record of the meiobenthic priapulid Tubiluchus from Cabo Verde and a comparison of external characters in adults within the genus

  Evolutionary Systematics, 10

  https://doi.org/

• 2026/01

  Taboada, S., Gracia-Sancha, C., Galià-Camps, C., Böhne, A., Monteiro, R., Marcussen, T., Oomen, R.A., Struck, T.H., Gut, M., Aguilera, L., Câmara Ferreira, F., Cruz, F., Gómez-Garrido, J., Alioto, T.S., Martin, F., Lazar, A., Haggerty, L., Bortoluzzi, C.

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  ERGA-BGE reference genome of Xylophaga dorsalis - a common deep-sea wood-boring bivalve with Atlantic-Mediterranean distribution

  Open Research Europe, 6

  https://doi.org/

• 2026/01

  Novo, M., Marchán, D.F., Gérard, S., Navarro, A.M., Monteiro, R., Böhne, A., Marcussen, T., Struck, T.H., Oomen, R.A., Aguilera, L., Gut, M., Ferreira, F.C., Gómez-Garrido, J., Cruz, F., Alioto, T., Lazar, A., Haggerty, L., Martin, F., Brown, T.

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  ERGA-BGE Genome of Ailoscolex lacteospumosus Bouché, 1969 – the enigmatic milky worm endemic to the Pyrenees

  Open Research Europe, 6

  https://doi.org/

• 2026/01

  Karakasi, D., Vardinoyannis, K., Bolanakis, G., Bitzilekis, E., Stratakis, M., Lymberakis, P., Poulakakis, N., Monteiro, R., Böhne, A., Fernández, R., Escudero, N., Genoscope Sequencing Team, ., Moussy, A., Cruaud, C., Labadie, K., Demirdjian, L., N’dar, A., Tricomi, F.F., Haggerty, L., Martin, F., Wincker, P., Oliveira, P.H., Aury, J., Brown, T.

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  ERGA-BGE genome of Albinariateres (Olivier, 1801): a rock-dwelling land snail endemic to the island of Crete, Greece

  Open Research Europe, 6

  https://doi.org/

• 2026/01

  Reichel, K., Pohjoismäki, J., Astrin, J., Böhne, A., Bortoluzzi, C., Bužan, E., del Campo, J., Ciofi, C., Di Nizo, C., Divakar, P.K., Greve, C., Hampl, V., Hilgers, L., Laine, V.N., Leonard, J.A., Lozano-Fernandez, J., Lukić Bilela, L., Mazzoni, C.J., McCartney, A.M., Melo-Ferreira, J., Monteiro, R., Oomen, R.A., Pavlek, M., Pimenta, J., Rindos, M., Seehausen, O., Tarieiev, A., Tomasello, S., Vinnere Pettersson, O., Waterhouse, R.M., Weber, A.A.-T., Zinenko, O., de Guttry, C.

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  From permits to samples: Addressing key challenges for high-quality reference genome generation in Europe

  Molecular Ecology resources, 2, 26

  https://doi.org/

• 2026/01

  Proesmans, W., Alaux, C., Albrecht, M., Bassit, K., Cyrille, N., Dalmon, A., Diévart, V., Dominik, C., Felten, E., Gajda, A., Heuschele, J.M., Laurent, E., Maurer, C., Neumann, P., Pioz, M., Schauer, A., Schweiger, O., Settele, J., Stolle, E., Szentgyörgyi, H., Yañez, O., Liu, Y., Żmuda, A., Paxton, R.J., Vanbergen, A.J.

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  Drivers of Viral Prevalence in Landscape‐Scale Pollinator Networks Across Europe: Honey Bee Viral Density, Niche Overlap With This Reservoir Host and Network Architecture

  Ecology letters, 1, 29

  https://doi.org/

• 2026/01

  Lemer, S., Rouze, H., Dodds, W., Fisher, M.

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  Stoichiometric regulation of nitrogen and carbon fluxes in Acropora coral facing short-term stress of ammonium loading

  Ecosphere, 1, 17

  https://doi.org/

2025

• 2025/11

  Verdes, A., Alvarez-Campos, P., Conejero, M., Riesgo, A., Böhne, A., Monteiro, R., Palma-Guerrero, J., Fernández, R., Gut, M., Aguilera, L., Câmara Ferreira, F., Cruz, F., Gómez-Garrido, J., S. Alioto, T., Bortoluzzi, C.

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  ERGA-BGE reference genome of the lineid heteronemertean Lineuslacteus (Pilidiophora, Nemertea)

  Open Research Europe, 5

  https://doi.org/

• 2025/10

  Polo, B., Milanoi, S., Omoke, D.N., Odhiambo, C.A., Nagi, S.C., Nwezeobi, J., Makunin, A.I., Boddé, M., Abong’o, B., Midega, J., Kamau, L., Onguru, D., Miles, A., Lawniczak, M., Ochomo, E.

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  Genetic isolation drives divergent insecticide resistance between coastal and western Kenya Anopheles funestus populations

  Scientific reports, 1, 15

  https://doi.org/

• 2025/10

  Bierenbroodspot, M.J., Darienko, T., de Vries, S., Delwiche, C.F., Lorenz, M., Ali, Z., Irisarri, I., Pröschold, T., de Vries, J.

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  Phylogenomics unveil a recent origin of morphological complexity in Coleochaetophyceae

  Current Biology, 20, 35

  https://doi.org/

• 2025/09

  Karbstein, K., Choudhary, N., Xie, T., Tomasello, S., Wagner, N.D., Barke, B.H., Paetzold, C., Bradican, J.P., Preick, M., Himmelbach, A., Stein, N., Papantonis, A., Irisarri, I., de Vries, J., Pucker, B., Hörandl, E.

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  Assembling genomes of non‐model plants: A case study with evolutionary insights from Ranunculus (Ranunculaceae)

  The Plant Journal, 6, 123

  https://doi.org/

• 2025/08

  Larragy, S.J., Colgan, T.J., Stolle, E., Mayack, C., Köhler, I., Stout, J.C., Carolan, J.C.

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  A Genome‐Wide Analysis of Structure and Evolution in Irish and British Populations of (L. 1758): Implications for Genetic Resource Conservation

  Evolutionary Applications, 8, 18

  https://doi.org/

• 2025/08

  Neumeister, D.S., Gonzalez, D., Gaugel, S.M., Yazıcı, T., Haug, J.T., Schielzeth, H., Bailey, R.I., Pereira, R.J.

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  Clarifying diversity in the radiation of Chorthippus grasshoppers (Orthoptera: Acrididae) through an integration of genomic and morphometric approaches

  Zoological journal of the Linnean Society, 4, 204

  https://doi.org/

• 2025/07

  Brasseur, M., Bakowski, C., Mayer, C., Podsiadlowski, L.

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  Heat stress responsive genes are not affected by ocean warming: long-term environmental monitoring and acute thermal stress experiments identify non-overlapping sets of differentially expressed genes in a marine fish

  https://doi.org/

• 2025/06

  Dadras, A., Duminil, P., de Vries, S., Irisarri, I., Feussner, I., de Vries, J.

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  Algal origins of core land plant stress response subnetworks

  The Plant Journal, 6, 122

  https://doi.org/

• 2025/05

  Dedukh, D., Malinovskaya, L., Kauzál, O., Rídl, J., Odnoprienko, D., Karamysheva, T., Vontzou, N., Janko, K., Suh, A., Albrecht, T., Torgasheva, A., Reifová, R.

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  Mechanisms and timing of programmed DNA elimination in songbirds

  https://doi.org/

• 2025/03

  Lemer, S., Lasley, R., Evans, N., Paulay, G.

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  Discovery of new montane crab (Brachyura: Sesarmidae: Sesarma Say, 1817) in Hispaniola highlights the impact of incumbent island biotas on colonization and diversification

  Journal of Crustacean Biology, 1, 15

  https://doi.org/

• 2025/01

  Jenike, K.M., Campos-Domínguez, L., Boddé, M., Cerca, J., Hodson, C.N., Schatz, M.C., Jaron, K.S.

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  k-mer approaches for biodiversity genomics

  Genome Research

  https://doi.org/

2024

• 2024/12

  Ord, T.J., Surovic, E.A., Vaz, D.F.B., Irisarri, I.

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  Abiotic factors that prompt major ecological transitions: Are fish on land to escape an intolerable aquatic environment?

  Functional ecology, 12, 38

  https://doi.org/