Zentrum für molekulare Biodiversitätsforschung (zmb)

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2026

• 2026/05

  Valencia-Cárdenas, V.M., Kulikov, N., Contreras-Martín, R., Ruiz-Ruano, F.J., Ben Hamadou, A., Greve, C., Estekani, S., Vaz, D.F.B., Ord, T.J., Irisarri, I.

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  The nuclear and mitochondrial genomes of the lined rockskipper, Istiblennius lineatus (Teleostei: Blenniidae)

  Genome Biology and Evolution

  https://doi.org/

• 2026/05

  De Keyzer, E.L.R., Herder, F., Böhne, A., Campuzano Jiménez, F., Burskaia, V., Kukowka, S., Tracey, A., Denton, A., Oatley, G., Wellcome Sanger Institute Tree of Life, p., Wellcome Sanger Institute Scientific Operations, D.P.c., Tree of Life, C.I.c., Mokodongan, D.F., Wowor, D., Svardal, H.

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  Ancient and recent riverine gene flow contributed to the adaptive radiation of sailfin silversides in Wallace's Dreampond

  Molecular Ecology

• 2026/05

  Taboada, S., Gracia-Sancha, C., Galià-Camps, C., Böhne, A., Monteiro, R., Marcussen, T., Oomen, R.A., Struck, T.H., Gut, M., Aguilera, L., Câmara Ferreira, F., Cruz, F., Gómez-Garrido, J., Alioto, T.S., Martin, F., Lazar, A., Haggerty, L., Bortoluzzi, C.

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  ERGA-BGE reference genome of Xylophaga dorsalis - a common deep-sea wood-boring bivalve with Atlantic-Mediterranean distribution

  Open Research Europe, 6

  https://doi.org/

• 2026/05

  Nuriddinov, M., Malinovskaya, L., Bobrovskikh, A., Gridina, M., Serdyukova, N.A., Suh, A., Ruiz-Ruano, F.J., Torgasheva, A.

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  Chromosome-level genome assembly of the sand martin (Riparia riparia)

  Scientific data

  https://doi.org/

• 2026/04

  Kück, P., Suh, A.

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  Persistent conflict in palaeognath phylogeny revealed by quartet-based and ML analyses

  Frontiers in Zoology

  https://doi.org/

• 2026/04

  Maurstad, M.F., Kusy, D., Undheim, E.A.B., Jakobsen, K.S., Böhne, A., Monteiro, R., Marcussen, T., Struck, T.H., Oomen, R.A., Bunikis, I., Tellgren-Roth, C., Heintz, J., Häggqvist, S., Jonsäll, L., Lager, N., Larva, T., Mosbech, M., Pippel, M., Vinnere Pettersson, O., Bortoluzzi, C.

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  ERGA-BGE reference genome of Osmylusfulvicephalus, the giant stream lacewing, Europe's representative of the family Osmylidae

  Open Research Europe, 6

  https://doi.org/

• 2026/04

  Muñoz-Sánchez, Á., Kulikov, N., Irisarri, I.

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  Stitch or Cluster? A Comparison of Alternative Phylogenomic Dataset Assembly Strategies for Blenny fish.

  Bulletin of the Society of Systematic Biologists, 1, 5

  https://doi.org/

• 2026/04

  VENCES, M., PATMANIDIS, S., KULIKOV, N., IRISARRI, I., SCHULZ, A., ROTHE, L., PETZOLD, A., SCHERZ, M.D., MIRALLES, A.

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  BlasTax—a user-friendly stand-alone tool to leverage the BLAST+ program for molecular taxonomy

  Megataxa, 2, 19

  https://doi.org/

• 2026/04

  Georgakakis, P., Karakasi, D., Lymberakis, P., Papadimitrakis, M., Stratakis, M., Bitzilekis, E., Poulakakis, N., Böhne, A., Monteiro, R., Fernández, R., Escudero, N., Genoscope Sequencing Team, ., Moussy, A., Cruaud, C., Labadie, K., Demirdjian, L., Mangenot, S., Belser, C., Wincker, P., Oliveira, P.H., Aury, J., Haggerty, L., Sinha, S., Martin, F., Bortoluzzi, C.

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  ERGA-BGE reference genome of the forest-restricted Cretan subspecies of Hanak's bat (Pipistrellus hanaki creticus), an IUCN Vulnerable species

  Open Research Europe, 5

  https://doi.org/

• 2026/03

  Schlebusch, S.A., Trifonov, V., Halenková, Z., Klianitskaya, M., Dedukh, D., Ruiz-Herrera, A., Álvarez-González, L., Pujol, G., Hřibová, E., Andjel, L., Bartoš, O., Pajer, P., Tichopád, T., Kulik, D., Kotusz, J., Kaštánková Doležálková, M., Böhne, A., Marta, A., Horna, P., Reifová, R., Guiguen, Y., Kuhl, H., Pačes, J., Janko, K.

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  Sex chromosome turnover and structural genome divergence shapes meiotic outcomes in hybridising Cobitis

  Gigascience

  https://doi.org/

• 2026/03

  Chen, A., Ruiz-Ruano, F.J., Contreras-López, O., Fouché, S., Suh, A., Pei, Y.

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  Paralog-aware assembly and filtering strategies reveal minimal nucleotide variation on the macro germline-restricted chromosome of the zebra finch

  Heredity

  https://doi.org/

• 2026/03

  Kozel, P., Bončina, A., Bužan, E., Böhne, A., Monteiro, R., Fernández, R., Escudero, N., Gut, M., Aguilera, L., Câmara Ferreira, F., Cruz, F., Gómez-Garrido, J., Alioto, T.S., Martin, F., Paola Barrera Enriquez, V., Haggerty, L., Bortoluzzi, C.

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  ERGA-BGE genome of Leiobunumsubalpinum - a montane-subalpine harvestman species endemic to the eastern Alps

  Open Research Europe, 6

  https://doi.org/

• 2026/03

  Salces-Ortiz, J., Eleftheriadi, K., Fernandez-Álvarez, F.Á., Fernández, R., Böhne, A., Monteiro, R., Marcussen, T., H. Struck, T., A. Oomen, R., Gut, M., Aguilera, L., Câmara Ferreira, F., Cruz, F., Gómez-Garrido, J., S. Alioto, T., Martin, F., Lazar, A., Haggerty, L., Bortoluzzi, C.

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  ERGA-BGE reference genome of Phorcus turbinatus - a water quality biomarker and species distributed along the Mediterranean coast

  Open Research Europe, 6

  https://doi.org/

• 2026/03

  Heil, K., Alioto, T., Böhne, A., Brown, T., Chadwick, E., Chua, P., de Guttry, C., De Panis, D., Goble, C., Gut, I., Gut, M., Juty, N., McTaggart, S., Najera-Cortazar, L., Paupério, J., Rewicz, T., Shaw, F., Soiland-Reyes, S., Waterhouse, R., Woollard, P., Vos, R.

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  Integrating the biodiversity genomics continuum: harmonising data from barcodes to reference genomes

  Research Ideas and Outcomes, 12

  https://doi.org/

• 2026/03

  Lopes, R.J., Böhne, A., Marcussen, T., Oomen, R.A., Struck, T.H., Aguilera, L., Gut, M., Câmara Ferreira, F., Cruz, F., Gómez-Garrido, J., Alioto, T.S., Monteiro, R.

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  ERGA-BGE reference genome of the Azores Bullfinch - Pyrrhula murina Godman, 1866: an IUCN vulnerable species endemic to a single island in the Azores Archipelago (Portugal)

  Open Research Europe, 5

  https://doi.org/

• 2026/03

  Vasileiadou, K., Manousaki, T., Böhne, A., Fernández, R., Escudero, N., Genoscope Sequencing Team, ., Moussy, A., Cruaud, C., Labadie, K., Demirdjian, L., Istace, B., Couloux, A., Wincker, P., H. Oliveira, P., Aury, J., Monteiro, R.

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  ERGA-BGE reference genome of Diadema setosum: the Black Longspine Urchin invading the Mediterranean sea

  Open Research Europe, 6

  https://doi.org/

• 2026/02

  Meng, G., Carvalho, L.S., Podsiadlowski, L., Huber, B.A.

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  Low coverage whole genome sequencing reveals a new subfamily of daddy long-legs spiders from Brazilian Caatinga (Araneae: Pholcidae)

  Arthropod Systematics & Phylogeny, 84

  https://doi.org/

• 2026/02

  Kück, P., Wilkinson, M.

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  Clarifying Xenacoelomorpha phylogeny: A polarized quartet-based analysis with SeaLion

  Gene

  https://doi.org/

• 2026/02

  Koureas, D., Beja, P., Blaxter, M., Böhne, A., Bourlat, S., Ekrem, T., Emerson, B., Heil, K., Melo-Ferreira, J., Price, B., Vos, R., Addink, W., Alioto, T., Aravanopoulos, F., Astrin, J., Aury, J., Barnes, I., Bruschini, C., Buzan, E., Cochrane, G., Cserkész, T., Dailianis, T., Duijm, E., Dunshea, G., Fernández, R., Ferreira, S., Formenti, G., Fratini, S., Gkagkavouzis, K., Goble, C., Grabowski, M., Grüning, B., Gut, I., Gut, M., Harrison, P., Hausmann, A., Höglund, J., Iacolina, L., Iannucci, A., Jakobsen, K., Kõljalg, U., Lantz, H., Lewin, H., Macher, J., Manousaki, T., Martin, F., Mengual, X., Oliveira, P., Oomen, R., Raupach, M., Riesgo, A., Roest Crollius, H., Somogyi, A., Struck, T., Svardal, H., Tooming-Klunderud, A., Triantafyllidis, A., Vinnere Pettersson, O., Wagner, M., Wincker, P., Yan, N., Alonso, J., Casino, A., Ciofi, C., Daňková, G., Hollingsworth, P., Lawniczak, M., Mazzoni, C., Waterhouse, R.

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  Biodiversity Genomics Europe (BGE) Project – Abridged Grant Proposal

  Research Ideas and Outcomes, 12

  https://doi.org/

• 2026/02

  Oriowo, T.O., Smith, S., Thormann, J., Sternberg, N., Böhne, A., Stange, M.

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  Different sex determination systems in two closely related Eurasian minnow (Phoxinus) species

  Heredity

  https://doi.org/

• 2026/02

  Fraser, B., Gasparini, C., Santi, F., Böhne, A., Monteiro, R., Marcussen, T., Oomen, R.A., Struck, T.H., Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory Team, ., Wellcome Sanger Institute Scientific Operations: Sequencing Operations, ., Wellcome Sanger Institute Tree of Life Core Informatics Team, ., Denton, A., Howard, C., Howe, K., Blaxter, M., McCarthy, S., Wood, J.M.D., Martin, F., Sinha, S., Haggerty, L., Bortoluzzi, C.

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  ERGA-BGE reference genome of Gambusiaholbrooki, a globally invasive freshwater fish

  Open Research Europe, 6

  https://doi.org/

• 2026/02

  Antaloudaki, E., Karakasi, D., Stratakis, M., Bitzilekis, E., Lymberakis, P., Poulakakis, N., Manousaki, T., Böhne, A., Monteiro, R., Fernández, R., Escudero, N., Genoscope Sequencing Team, ., Moussy, A., Cruaud, C., Labadie, K., Demirdjian, L., Wincker, P., Oliveira, P.H., Aury, J., Martin, F., Barrera Enriquez, V.P., Haggerty, L., Bortoluzzi, C.

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  ERGA-BGE reference genome of Carlina diae, an endemic spineless thistle of Crete, Greece

  Open Research Europe, 6

  https://doi.org/

• 2026/02

  Postma, A., Klynsmith, L., Duong, T.A., Allison, J.D., Smidt, W., Waterhouse, R.M., Lesny, P., Oeyen, J.P., Petersen, M., Martin, S., Liu, S., Zhou, X., Ziesmann, T., Donath, A., Mayer, C., Misof, B., Niehuis, O., Peters, R.S., Podsiadlowski, L., Coetzee, M.P.A., Joubert, F., Slippers, B.

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  Genome and transcriptome‐based identification and expression profiling of chemosensory gene families across developmental stages and tissues in Sirex noctilio (Hymenoptera: Siricidae)

  Insect Molecular Biology

  https://doi.org/

• 2026/01

  Schwarzer, J., Schüller, A., Möhring, J., Spanke, T., Nolte, A., Herder, F.

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  Recommendation of scientific fish husbandry: Sulawesi ricefishes (Beloniformes, Adrianichthyidae)

  Bulletin of Fish Biology, 1, 21

  https://doi.org/

• 2026/01

  Schmidt-Rhaesa, A., Sorensen, M.V., Ott, J., Raeker, J.

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  A new record of the meiobenthic priapulid Tubiluchus from Cabo Verde and a comparison of external characters in adults within the genus

  Evolutionary Systematics, 10

  https://doi.org/