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Experimental & Applied Ecology, Bonn

Our tasks

The Applied and Experimental Ecology Section was founded in 2021. In addition to its own research, the section is responsible for coordinating ecological research and managing the research infrastructure of the Ecology Lab, as well as training and advising LIB researchers and student research projects.

Research within the section contributes to the assessment of biodiversity change through innovative approaches in laboratory and field experiments. The aim is to go beyond pure biodiversity monitoring to identify the causes and interactions with the drivers of climate and biodiversity change in the Anthropocene and to derive consequences for species and entire communities.

Goals

  • Experimental research on drivers of biodiversity change
  • Standardisation of methods for integration into monitoring programmes
  • Development and application of innovative technologies and monitoring approaches
  • Investigating the impact of climate & biodiversity change under auto- & synecological aspects
  • Integration of research on functional traits, multitrophic interactions and movement ecology
  • Establish hypothesis networks based on ecological theory and predict future scenarios
  • Training of ecologists & taxonomists
  • Function as an integrative ecological laboratory at the LIB

Approaches

  • Monitoring at landscape level under land use aspects & inclusion of environmental gradients
  • Field experiments with treatments & replicated design
  • Controlled experiments in climate chambers and greenhouses
  • Technology development
  • Testing & use of semi-automated image recognition methods - for identification and pre-sorting of monitoring composite samples
  • Method comparisons and verification
  • Theory-based experiments on species interactions

In order to achieve these goals, the section is closely networked within the zbm with the Conservation Ecology, Metabarcoding, Geo-Palaeontology and Mineralogy sections, and LIB-wide with the zmb and ztm centres and the central research infrastructures (e.g. biobank, biodiversity informatics, morphology laboratory).

Ecological laboratory infrastructure

  • Invertebrate monitoring systems: Bottom funnel traps, window/wing traps, landing nets, audio detectors (Audiomoth), light traps*(Nature Conservation Ecology Section), Malaise traps*(Nature Conservation Ecology Section), AMMOD system*(Metabarcoding Section)
  • Vertebrate monitoring systems: Wildlife cameras, audio detectors (Audiomoth), field optics (binoculars, spotting scopes)
  • In the process of being established: Climatic cabinets for insect breeding & other laboratories
  • In the process of being established: experimental areas at the LIB and experimental farm / field station

Contact person

Dr. David Ott

  • Head of Section Experimental & Applied Ecology
  • Ecological laboratory (zbm facilities, field sites, upcoming station)

Phone: +49 228 9122 452
E-Mail: d.ott@leibniz-lib.de

Projects

Publications

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    2025

  • 2025/1

    Mozer, A., Di‐Nizo, C.B., Consul, A., Huettel, B., Jäger, R., Akintayo, A., Erhardt, C., Fenner, L., Fischer, D., Forat, S., Gimnich, F., Grobe, P., Martin, S., Nathan, V., Saeed, A., von der Mark, L., Woehle, C., Olek, K., Misof, B., Astrin, J.J.

    Show more...

    FOGS: A SNPSTR Marker Database to Combat Wildlife Trafficking and a Cell Culture Bank for Ex‐Situ Conservation

    Molecular Ecology resources

  • 2025/1

    Kirse, A., Wittenhorst, M.A., Scherber, C., Posanski, M., Scherges, A., Zizka, V., Ott, D., Noll, N.W., Wägele, W.J.

    Show more...

    The clockwork of insect activity: Advancing ecological understanding through automation

    Journal of Animal Ecology

  • 2024

  • 2024/9

    Krüger, J., Buchholz, S., Schmitt, S., Blankenhaus, K., Pernat, N., Ott, D., Hollens‐Kuhr, H.

    Show more...

    You are what you eat – The influence of polyphagic and monophagic diet on the flight performance of bees

    Ecology and Evolution, 9, 14

  • 2024/6

    Mozer, A., Consul, A., Misof, B., Jäger, R., Olek, K., Astrin, J.J.

    Show more...

    Joint detection of microsatellites and flanking sequences–SNPSTR markers for Athene noctua to fight illegal wildlife trade

    Forensic Science International Animals and Environments, 5

  • 2024/4

    Dietz, L., Eberle, J., Mayer, C., Kukowka, S., Bohacz, C., Baur, H., Espeland, M., Huber, B., Hutter, C., Mengual, X., Peters, R., Vences, M., Wesener, T., Willmott, K., Misof, B., Niehuis, O., Ahrens, D.

    Show more...

    Standardized nuclear markers improve and homogenize species delimitation in Metazoa (vol 14, pg 543, 2023)

    Methods in Ecology and Evolution, 4, 15

  • 2024/3

    Wang, S., Schneider, D., Hartke, T.R., Ballauff, J., de Melo Moura, C.C., Schulz, G., Li, Z., Polle, A., Daniel, R., Gailing, O., Irawan, B., Scheu, S., Krashevska, V.

    Show more...

    Optimising high-throughput sequencing data analysis, from gene database selection to the analysis of compositional data: a case study on tropical soil nematodes

    Frontiers in ecology and evolution, 12

  • 2023

  • 2023/2

    Dietz, L., Eberle, J., Mayer, C., Kukowka, S., Bohacz, C., Baur, H., Espeland, M., Huber, B.A., Hutter, C.R., Mengual, X., Peters, R.S., Vences, M., Wesener‍, T., Willmott, K.R., Misof, B., Niehuis, O., Ahrens, D.

    Show more...

    Standardized nuclear markers improve and homogenize species delimitation in Metazoa

    Methods in Ecology and Evolution, 2, 14

  • 2023/1

    Kasmiatun, ., Hartke, T.R., Buchori, D., Hidayat, P., Siddikah, F., Amrulloh, R., Hiola, M.S., Najmi, L., Noerdjito, W.A., Scheu, S., Drescher, J.

    Show more...

    Rainforest conversion to smallholder cash crops leads to varying declines of beetles (Coleoptera) on Sumatra

    Biotropica, 1, 55

  • 2022

  • 2022/12

    Mawan, A., Hartke, T.R., Deharveng, L., Zhang, F., Buchori, D., Scheu, S., Drescher, J.

    Show more...

    Response of arboreal Collembola communities to the conversion of lowland rainforest into rubber and oil palm plantations

    BMC ecology and evolution, 1, 22

  • 2022/8

    Ramos, D., Hartke, T.R., Buchori, D., Dupérré, N., Hidayat, P., Lia, M., Harms, D., Scheu, S., Drescher, J.

    Show more...

    Rainforest conversion to rubber and oil palm reduces abundance, biomass and diversity of canopy spiders

    PeerJ, 10

  • 2020

  • 2020/4

    Gutiérrez, Y., Ott, D., Scherber, C.

    Show more...

    Direct and indirect effects of plant diversity and phenoxy herbicide application on the development and reproduction of a polyphagous herbivore

    Scientific reports, 10

  • 2020/4

    Gutiérrez, Y., Fresch, M., Ott, D., Brockmeyer, J., Scherber, C.

    Show more...

    Diet composition and social environment determine food consumption, phenotype and fecundity in an omnivorous insect

    Royal Society open science, 4, 7

  • 2020/0

    Udy, K., Reininghaus, H., Scherber, C., Tscharntke, T.

    Show more...

    Plant-pollinator interactions along an urbanization gradient from cities and villages to farmland landscapes

    Ecosphere, 2, 11

  • 2019

  • 2019/9

    Meyer, M., Ott, D., Scherber, C.

    Show more...

    Influence of temporal diversification on aboveground arthropods

    First European Conference on Crop Diversification

  • 2019/8

    Scherber, C., Reininghaus, H., Brandmeier, J., Everwand, G., Gagić, V., Greiwe, T., Kormann, U., Meyer, M., Nagelsdiek, S., Rösch, V., Sobek-Swant, S., Thies, C., Ott, D.

    Show more...

    Insect diversity and ecological processes in agricultural and forest landscapes.

    6/7, 94

  • 2019/5

    Meyer, M., Ott, D., Götze, P., Koch, H., Scherber, C.

    Show more...

    Crop identity and memory effects on aboveground arthropods in a long-term crop rotation experiment

    Ecology and Evolution

  • 2019/5

    Scherber, C., Reininghaus, H., Brandmeier, J., Everwand, G., Gagić, V., Greiwe, T., Kormann, U.G., Meyer, M., Nagelsdiek, S., Rösch, V., Sobek-Swant, S., Thies, C., Ott, D.

    Show more...

    Insektenvielfalt und ökologische Prozesse in Agrar- und Waldlandschaften

    Natur und Landschaft, 6/7, 94

  • 2018

  • 2018/7

    Gutiérrez, Y., Ott, D., Töpperwien, M., Salditt, T., Scherber, C.

    Show more...

    X-ray computed tomography and its potential in ecological research: A review of studies and optimization of specimen preparation

    Ecology and Evolution

Employees

  • Lea Theile

    zbm Applied & Experimental Ecology

    Phone: +49 228 9122 462
    E-mail: l.theile@leibniz-lib.de

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