Genomes of “star algae” shed light on origin of plants

Liquid samples of different Zygnema circumcarinatum cell cultures, all stored in the Culture Collection of Algae at Göttingen University. © Tatyana Darienko

 

How do land plants continuously adapt to their changing environmental conditions? This question was addressed by an international research team, including Dr. Iker Irisarri from the LIB. As part of their study, they generated the first genomes of four filamentous “star algae” – the closest relatives of land plants. The results were published on May 1st in the journal Nature Genetics.

Land plants cover the surface of our planet and often tower over us. They form complex bodies with multiple organs that consist of a broad range of cell types. Developing this morphological complexity is underpinned by intricate networks of genes, whose coordinated action shapes plant bodies through various molecular mechanisms. All of these magnificent forms burst forth from a one-off evolutionary event: when plants conquered Earth’s surface, known as plant terrestrialization. Among those algae most closely related to land plants, diverse body types are found – ranging from single-celled algae to more complex cell filaments. From this group of relatives, an international group of researchers led by the Universities of Göttingen and Nebraska–Lincoln has now generated the first genome data of such complex specimens, on four filamentous “star algae” of the genus Zygnema. Their results were published in Nature Genetics.

The researchers worked with four algal strains in total, two from a culture collection in the USA and two that have been kept safe in the Algal Culture Collection at Göttingen University (SAG). The research involved more than 50 scientists from nine countries who combined a range of cutting-edge sequencing techniques to elucidate the entire DNA sequence of these algae. The advanced methods enabled them to generate complete genomes for these organisms at the level of whole chromosomes – something that had never been done before on this group of algae. Comparing the genes on the genomes with those of other plants and algae led to the discovery of specific overabundances of signalling genes and environmental response factors. Dr Iker Irisarri, Leibniz Institute for the Analysis of Biodiversity Change, explains: “Many of these genes underpin molecular functions that were important for the emergence of the first multicellular terrestrial plants. It is fascinating that the genetic building blocks, whose origins predate land plants by millions of years, duplicated and diversified in the ancestors of plants and algae and, in doing so, enabled the evolution of more specialized molecular machinery”.

Professor Jan de Vries, University of Göttingen, says: “Not only do we present a valuable, high-quality resource for the entire plant scientific community, who can now explore these genome data, our analyses uncovered intricate connections between environmental responses. This sheds light on one of land plants’ most important features: their ability to adjust their growth and development so that it aligns with the environment in which they dwell – a process known as developmental plasticity.”

The filamentous streptophyte alga Zygnema growing in a cell culture flask. © Tatyana Darienko
Microscope image of Zygnema circumcarinatum, a filamentous alga with a star-shaped chloroplast. Because of this feature, algae of the genus Zygnema are also called “star algae” (scale is 50 µm, corresponding to 0.05 mm). © Tatyana Darienko

Original publication
Xuehuan Feng et al. Genomes of multicellular algal sisters to land plants illuminate signaling network evolution. Nature Genetics 2024. Doi: 10.1038/s41588-024-01737-3.

Contact
Dr Iker Irisarri
Head of Phylogenetics/Phylogenomics
Center for Molecular Biodiversity Research (zmb)
Tel.: +49 40 238317-716
E-Mail: i.irisarri@leibniz-lib.de

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